#

odgi

Here are 4 public repositories matching this topic...

Flavia95 / VGpop

Population genetics analysis on VG

graphs gfa odgi

Updated Apr 22, 2021
Python

pangenome / spodgi

RDF and SPARQL ideas to build on top of [odgi](https://github.com/pangenome/odgi)

sparql rdflib gfa variation-graphs odgi

Updated Mar 20, 2024
Python

samuelburger27 / PanGraphX

Highly parallel library and CLI tool for conversion between pangenome graph formats

rust bioinformatics gfa vg pangenome gbz odgi

Updated Nov 3, 2026
Rust

yykaya / PanBreak

Local pangenome graph bubble annotation and junction k-mer genotyping of structural variants and TE insertions from short reads

k-mer population-genetics pangenome genotyping structural-variants odgi pggb

Updated Nov 3, 2026
Python

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