pangenome
graphical pangenomic methods
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Showing 10 of 93 repositories
- phrs Public
Genome-wide pseudo-homologous regions (PHRs) — lab notebook for Nature submission with HPRCv2
- sxgc Public
sxgc — s-χ-GC: suffixient-χ (suffixient-array) indexing of AGC genome collections, with name-space mapping and banded builds
- syng Public Forked from richarddurbin/syng
syncmer graphs, and perhaps other sorts of sequence graphs
- gfasort Public
Rust library and CLI for sorting bidirected pangenome graphs using configurable pipelines (path-guided SGD, grooming, topological sort)