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Open Source Better Science
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Open Source Better Science
904 followers · 581 following

Achievements

Achievement: Pair Extraordinairex4Achievement: Pull Sharkx4Achievement: Galaxy BrainAchievement: Starstruckx2Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair Extraordinairex4Achievement: Pull Sharkx4Achievement: Galaxy BrainAchievement: Starstruckx2Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

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Organizations

@ropensci @conda-forge @openbiox @OncoHarmony-Network @Traitome @oxo-flow-community

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ShixiangWang/README.md

Dr. Shixiang Wang | Associate Professor at CSU

Leader of Laboratory of In Silico Oncology and Medicine, and

co-leadership of OncoHarmony Network with Prof. Jian-Guo Zhou.

About

🔬 Research Focus: Bioinformatics · Cancer Genomics · Multi-omics Analysis
🛠️ Development: Developer specializing in open-source tools for reproducible bioinformatics
🎯 Mission: Building accessible workflows and packages for clinical and research bioinformatics

Resources & Links:

Featured Projects

🌟 UCSCXenaShiny — Interactive Shiny app for exploring UCSC Xena datasets
🔧 UCSCXenaTools — R toolkit to access and manipulate UCSC Xena data
⚗️ bregr — Selected research software from WangLab @ CSU
📰 weekly — Openbiox Weekly: curated bioinformatics news and resources
🎓 Tech-Workshop — OncoHarmony Network workshops and teaching materials

Connect with Me

💬 Discussion & Support: GitHub Discussions | Email

bilibili wechat zhihu twitter scholar

GitHub Stats

🐱 My GitHub Data

📦 5.0 MB Used in GitHub's Storage

🏆 6,633 Contributions in the Year 2026

🚫 Not Opted to Hire

📜 101 Public Repositories

🔑 31 Private Repositories

I'm an Early 🐤

🌞 Morning                6595 commits        █████░░░░░░░░░░░░░░░░░░░░   18.11 % 
🌆 Daytime                12930 commits       █████████░░░░░░░░░░░░░░░░   35.50 % 
🌃 Evening                11587 commits       ████████░░░░░░░░░░░░░░░░░   31.81 % 
🌙 Night                  5310 commits        ████░░░░░░░░░░░░░░░░░░░░░   14.58 %

📅 I'm Most Productive on Wednesday

Monday                   5534 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.19 % 
Tuesday                  5557 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.26 % 
Wednesday                5892 commits        ████░░░░░░░░░░░░░░░░░░░░░   16.18 % 
Thursday                 5523 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.16 % 
Friday                   5602 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.38 % 
Saturday                 3989 commits        ███░░░░░░░░░░░░░░░░░░░░░░   10.95 % 
Sunday                   4325 commits        ███░░░░░░░░░░░░░░░░░░░░░░   11.87 %

🤖 AI Coding This Week

No AI Coding Activity Tracked This Week

I Mostly Code in R

R                        101 repos           ███████████░░░░░░░░░░░░░░   45.91 % 
Python                   33 repos            ████░░░░░░░░░░░░░░░░░░░░░   15.00 % 
HTML                     25 repos            ███░░░░░░░░░░░░░░░░░░░░░░   11.36 % 
Rust                     9 repos             █░░░░░░░░░░░░░░░░░░░░░░░░   04.09 % 
SCSS                     3 repos             ░░░░░░░░░░░░░░░░░░░░░░░░░   01.36 %

Last Updated on 31/10/2026 22:27:29 UTC

These Readme stats are generated using github action awesome-readme-stats

NOTE: Top languages does not indicate my skill level or anything like that. It is just a metric of which languages have been hosted by me on GitHub based on the usage across repositories.

Pinned Loading

  1. Traitome/oxo-flow Traitome/oxo-flow Public

    Build, verify, and scale bioinformatics workflows from first principles

    Rust 25 3

  2. openbiox/UCSCXenaShiny openbiox/UCSCXenaShiny Public

    📊 An R package for interactively exploring UCSC Xena https://xenabrowser.net/datapages/; Book: https://lishensuo.github.io/UCSCXenaShiny_Book; App online: https://shiny.zhoulab.ac.cn/UCSCXenaShiny,…

    R 104 34

  3. sigminer sigminer Public

    🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html

    R 162 20

  4. WangLabCSU/bregr WangLabCSU/bregr Public

    Easy and Efficient Batch Processing of Regression Models in R

    R 15 3

  5. WangLabCSU/otk WangLabCSU/otk Public

    Python

  6. Handbook_of_biostatistic_R Handbook_of_biostatistic_R Public

    📗handbook of biostatistic and R

    HTML 75 24