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PennChopMicrobiomeProgram
seqBackup
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Add backup_nanopore for archiving Oxford Nanopore runs
Tests
#43:
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#22
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Add backup_nanopore for archiving Oxford Nanopore runs
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Add backup_nanopore for archiving Oxford Nanopore runs
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#41:
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Reformat
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Merge pull request #21 from PennChopMicrobiomeProgram/codex/retrieve-…
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Simplify machine type loading with TSV fetch and fallback
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#38:
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codex/retrieve-machine-mapping-from-external-source-h6mpk7
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Add TSV-backed machine type loader with in-memory cache and fallback warnings
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Add TSV-backed machine type loader with in-memory cache and fallback warnings
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Add TSV-backed machine type loader with in-memory cache and fallback warnings
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Add TSV-backed machine type loader with in-memory cache and fallback warnings
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codex/retrieve-machine-mapping-from-external-source
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Merge pull request #19 from PennChopMicrobiomeProgram/codex/add-optio…
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Add --allow-check-failures CLI flag to continue backup on validation failures
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Add --allow-check-failures CLI flag to continue backup on validation failures
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Add archive verification command
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Add archive verification command
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Add Docker image build and publish automation
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#17
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codex/add-dockerfile-and-github-actions-workflow
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