Hancock Lab
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SNP_calling_Arabidopsis
SNP_calling_Arabidopsis PublicPipeline for SNP calling using sequencing data from Arabidopsis thaliana
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SVs_in_1301_A.thaliana_lines_Main_Figures
SVs_in_1301_A.thaliana_lines_Main_Figures PublicAll scripts related with SVs Paper
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African_A.thaliana
African_A.thaliana PublicDurvasula and Fulgione et al 2017. "African genomes illuminate the early history and transition to selfing in Arabidopsis thaliana" PNAS 2017, 114(20):5213-5218. URL: http://www.pnas.org/content/11…
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SVs_in_1301_A.thaliana_lines
SVs_in_1301_A.thaliana_lines PublicForked from arq5x/lumpy-sv
Structural Variation Calling Pipeline with NGS Data
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Fogo-Edaphic
Fogo-Edaphic PublicThis repository is associated with the paper: A two-step adaptive walk rewires nutrient transport in a challenging edaphic environment
Repositories
- CVI-Boron Public
This repository is associated with the paper: Convergent evolution increases boron transport through SNPs and tandem duplications at BOR1 and BOR2 in Arabidopsis thaliana
- Leaf-Mg Public
This repository is associated with the paper: Multiple independent MGR5 alleles contribute to a clinal pattern in leaf magnesium across the distribution of A. thaliana
- CVI-flowering-time-architecture Public
This directory contains information related to the manuscript: Genetic architecture of flowering time differs between populations with contrasting demographic and selective histories
- CVI_WUE_MPK12_LocalAdapt Public
- Fogo-Edaphic Public
This repository is associated with the paper: A two-step adaptive walk rewires nutrient transport in a challenging edaphic environment
- CVI Public
- SNP_calling_Arabidopsis Public
Pipeline for SNP calling using sequencing data from Arabidopsis thaliana
- SVs_in_1301_A.thaliana_lines Public Forked from arq5x/lumpy-sv
Structural Variation Calling Pipeline with NGS Data
- African_A.thaliana Public
Durvasula and Fulgione et al 2017. "African genomes illuminate the early history and transition to selfing in Arabidopsis thaliana" PNAS 2017, 114(20):5213-5218. URL: http://www.pnas.org/content/114/20/5213.long
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