All pull requests

Pull requests

• fix(archaic): stop counting unread sites as matching the reference

  #427·geiresx opened Nov 15, 2026Collaborator·

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  1

• fix(bloodtype): read the indel record, not the reference one, at shared ABO positions

  #424·geiresx opened Nov 15, 2026Collaborator·

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  1

• build(rust): give every remaining port its own crate and verb so lanes stop colliding

  #423·geiresx opened Nov 15, 2026Collaborator·

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  1

• fix(setup): install the VEP caches and the CPSR bundle by default so a default run screens secondary findings

  #422·geiresx opened Nov 15, 2026Collaborator·

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  4

• feat(live): open the reads under the map once you zoom below 50 kb

  #421·geiresx opened Nov 15, 2026Collaborator·

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  1

• fix(pgx): stop warning against valproate for one recessive hit, and drop the SCN1A drug warnings

  #420·geiresx opened Nov 15, 2026Collaborator·

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  3

• fix(recheck): say the check failed when every lookup failed, and rerun with typed arguments

  #419·geiresx opened Nov 15, 2026Collaborator·

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  7

• fix(archive): check CRAM content against the BAM before deleting the BAM

  #418·geiresx opened Nov 15, 2026Collaborator·

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  4

• fix(clinvar): keep ClinVar's condition on each hit so later steps can tell which disease it is

  #417·geiresx opened Nov 15, 2026Collaborator·

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  3

• docs(licence): say GPL-3.0-or-later everywhere and cite the ACMG table correctly

  #416·geiresx opened Nov 15, 2026Collaborator·

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  3

• fix(roh): measure F_ROH over the chromosomes the run covered

  #415·geiresx opened Nov 15, 2026Collaborator·

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  9

• perf(report): collect each sample once per run, in Rust

  #413·geiresx opened Nov 14, 2026Collaborator·

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  12

• fix(live): keep a child's whole report closed until every result to act on is opened

  #388·geiresx opened Nov 12, 2026Collaborator·

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  23